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| DC Field | Value | Language |
|---|---|---|
| dc.contributor.advisor | 윤현철 | - |
| dc.contributor.author | 오유정 | - |
| dc.date.issued | 2024-08 | - |
| dc.identifier.other | 34134 | - |
| dc.identifier.uri | https://aurora.ajou.ac.kr/handle/2018.oak/39186 | - |
| dc.description | 학위논문(석사)--분자과학기술학과,2024. 8 | - |
| dc.description.abstract | In this study, we developed a molecular diagnostic platform using portable equipment for point-of-care testing (POCT) to address the l imitations of traditional methods of Salmonella detection that are often labor-intensive, t ime-consuming, and require complex equipment. To miniaturize the process of DNA amplif ication, we employed loop-mediated isothermal amplif ication (LAMP) to amplify target genes at a constant temperature, replacing large thermocyclers with compact thermoelectric Peltier elements. We also introduced a non- spectroscopic analysis method , retroreflective, to overcome the drawbacks of f luorescence analysis, which involves complex and expensive equipment. Through this method, we converted the traditional f luorescence spectrometer into a simple system util izing an LED light source and a camera . Retroreflective Janus particles (RJPs) were introduced as optical probes, and specially designed LAMP primers were used to generate double-stranded molecular beacons with specific recognition sequences at each 5 ’ end. When combined with DNA-immobilized substrate and the avidin-immobilized RJPs, these amplicons formed a sandwich-type complex. Under non-spectroscopic conditions, the RJPs produced a bright optical signal that correlated with the concentration of DNA amplicons. We successfully demonstrated quantitative analysis of the foodborne pathogen Salmonella , achieving a limit of detection of 10 CFU by util izing the developed POCT platform. | - |
| dc.description.tableofcontents | 1. Introduction 1_x000D_ <br> 1.1 The importance of detecting Salmonella 1_x000D_ <br> 1.2 Conventional method of detecting Salmonella 1_x000D_ <br> 1.3 The capability of isothermal amplification to amplify the target gene without requiring sophisticated equipment 4_x000D_ <br> 1.4 Retroreflective-based detection of amplified product 5_x000D_ <br> 1.5 Aim of the Thesis 8_x000D_ <br>2. Materials and methods 10 _x000D_ <br> 2.1 Reagents and apparatus 10_x000D_ <br> 2.2 Primer design for LAMP assay of Salmonella 12_x000D_ <br> 2.3 Target gene preparation in a sample of Salmonella 14_x000D_ <br> 2.4 Optimization of amplification time using a hand-held amplification system 14_x000D_ <br> 2.5 Fabrication of sensing surface and optical probes 15_x000D_ <br> 2.6 Purification of the LAMP-based amplified product 18_x000D_ <br> 2.7 Quantitative analysis of the Salmonella using the developed system 19_x000D_ <br>3. Results and discussion 20_x000D_ <br> 3.1 Primer design for target gene amplification 20_x000D_ <br> 3.2 Development of a miniaturized amplification system 23_x000D_ <br> 3.2.1 Development of a hand-held amplification system 23_x000D_ <br> 3.2.2 Optimization of duration of gene amplification 26_x000D_ <br> 3.3 Confirmation of surface functionalization for specific target analysis 28 _x000D_ <br> 3.3.1 Verification of the sensing surface modification 28_x000D_ <br> 3.3.2 Verification of the optical probe's modification 29_x000D_ <br> 3.4 Feasibility test of the sandwich-type amplified product quantitative assay 32_x000D_ <br> 3.5 Verification of the newly developed purification system 37_x000D_ <br> 3.5.1 Development of a hand-held purification system 37_x000D_ <br> 3.5.2 Optimization of the gel electrophoresis condition 39_x000D_ <br> 3.6 Quantitative analysis according to the concentration of Salmonella 45_x000D_ <br>4. Conclusions 48_x000D_ <br>5. References 49 | - |
| dc.language.iso | eng | - |
| dc.publisher | The Graduate School, Ajou University | - |
| dc.rights | 아주대학교 논문은 저작권에 의해 보호받습니다. | - |
| dc.title | A point-of-care testing molecular diagnostic device integrating loop-mediated isothermal amplification and retroreflective optical analysis modules | - |
| dc.type | Thesis | - |
| dc.contributor.affiliation | 아주대학교 대학원 | - |
| dc.contributor.department | 일반대학원 분자과학기술학과 | - |
| dc.date.awarded | 2024-08 | - |
| dc.description.degree | Master | - |
| dc.identifier.url | https://dcoll.ajou.ac.kr/dcollection/common/orgView/000000034134 | - |
| dc.subject.keyword | LAMP | - |
| dc.subject.keyword | RJP | - |
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