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Optimization of Transposon Mutagenesis Methods in Pseudomonas antarcticaoa mark
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Publication Year
2023-01-01
Publisher
MDPI
Citation
Microorganisms, Vol.11
Keyword
PseudomonasPseudomonas antarcticatransposontransposon insertion mutant library
All Science Classification Codes (ASJC)
MicrobiologyMicrobiology (medical)Virology
Abstract
Pseudomonas is a widespread genus in various host and environmental niches. Pseudomonas exists even in extremely cold environments such as Antarctica. Pseudomonas antarctica is a psychrophilic bacterium isolated from Antarctica. P. antarctica is also known to produce antimicrobial substances. Although P. antarctica can provide insight into how bacteria have adapted to low temperatures and has significant potential for developing novel antimicrobial substances, progress in genetic and molecular studies has not been achieved. Transposon mutagenesis is a useful tool to screen genes of interest in bacteria. Therefore, we attempted for the first time in P. antarctica to generate transposon insertion mutants using the transfer of a conjugational plasmid encoding a transposon. To increase the yield of transposon insertion mutants, we optimized the methods, in terms of temperature for conjugation, the ratio of donor and recipient during conjugation, and the concentration of antibiotics. Here, we describe the optimized methods to successfully generate transposon insertion mutants in P. antarctica.
ISSN
2076-2607
Language
eng
URI
https://dspace.ajou.ac.kr/dev/handle/2018.oak/33215
DOI
https://doi.org/10.3390/microorganisms11010118
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Type
Article
Funding
This work was supported by the Korea Polar Research Institute (KOPRI) grant funded by the Ministry of Oceans and Fisheries (KOPRI project No. PE22900). Changhan Lee received funding from the National Research Foundation of Korea (NRF) funded by the Korean government (MSIT) (grant 2021R1C1C1011690), the Basic Science Research Program through the NRF funded by the Ministry of Education (grant 2021R1A6A1A10044950), and the new faculty research fund of Ajou University.
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Lee, Changhan이창한
Department of Biological Sciences
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