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Effects of osmolytes on salt resistance of Halomonas socia CKY01 and identification of osmolytes-related genes by genome sequencing
  • Park, Ye Lim ;
  • Choi, Tae Rim ;
  • Han, Yeong Hoon ;
  • Song, Hun Suk ;
  • Park, Jun Young ;
  • Bhatia, Shashi Kant ;
  • Gurav, Ranjit ;
  • Choi, Kwon Young ;
  • Kim, Yun Gon ;
  • Yang, Yung Hun
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Publication Year
2020-10-10
Publisher
Elsevier B.V.
Citation
Journal of Biotechnology, Vol.322, pp.21-28
Keyword
Halomonas strainOsmolytesSalt toleranceWhole genome sequencing
Mesh Keyword
Bacterial genomesBio-surfactantsGenome sequencingHydrolase activitiesMarine bacteriumPolyhydroxybutyrateSaline conditionsSalt resistance
All Science Classification Codes (ASJC)
BiotechnologyBioengineeringApplied Microbiology and Biotechnology
Abstract
Bacteria from the genus Halomonas hold promise in biotechnology as sources of salt-tolerant enzymes, biosurfactants, biopolymers, osmolytes, and as actors in bioremediation processes. In a previous work, we have identified Halomonas socia strain CKY01 having various hydrolase activities. Here, we aimed to study the survival strategies of marine bacteria. A deep genome sequencing study of H. socia CKY01 has revealed 4627 genes reaching 4,753,299 bp with 64 % of GC content. This strain produced polyhydroxybutyrate (PHB) having one gene clusters having phaC and phasin, and it has several genes responsible for the uptake, synthesis, and transport of the osmolytes such as betaine, choline, ectoine, carnitine, and proline in the bacterial genome. The addition of 60 mM glutamate, 60 mM proline and 60 mM ectoine enhanced growth 300.8 %, 294.2 % and 235.0 %, respectively, under 10 % saline conditions. In particular, ectoine and proline increased salt resistance and allowed cells to survive in more than 15 % NaCl. By combining experimental and genome sequencing data, we have investigated the importance of osmolytes on the survival of this Halomonas strain.
Language
eng
URI
https://dspace.ajou.ac.kr/dev/handle/2018.oak/31421
DOI
https://doi.org/10.1016/j.jbiotec.2020.07.006
Fulltext

Type
Article
Funding
This paper was supported by Konkuk University in 2019.
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College of Bio-convergence Engineering
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