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Complete genome sequence of Planococcus faecalis AJ003T, the type species of the genus Planococcus and a microbial C30 carotenoid produceroa mark
  • Kim, Jin Won ;
  • Choi, Bo Hyun ;
  • Kim, Jin Ho ;
  • Kang, Hyun Jun ;
  • Ryu, Hoon ;
  • Lee, Pyung Cheon
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Publication Year
2018-01-20
Publisher
Elsevier B.V.
Citation
Journal of Biotechnology, Vol.266, pp.72-76
Keyword
CarotenoidsComplete genome sequenceGene clusterPlanococcus faecalis
Mesh Keyword
Carotenoid biosynthesisCarotenoidsComplementationComplete genomesDesaturaseGene clustersMEP pathwaysPlanococcus faecalisBacterial ProteinsCarotenoidsGenome, BacterialPlanococcus Bacteria
All Science Classification Codes (ASJC)
BiotechnologyBioengineeringApplied Microbiology and Biotechnology
Abstract
A novel type strain, Planococcus faecalis AJ003T, isolated from the feces of Antarctic penguins, synthesizes a rare C30 carotenoid, glycosyl-4,4ʹ-diaponeurosporen-4ʹ-ol-4-oic acid. The complete genome of P. faecalis AJ003T comprises a single circular chromosome (3,495,892 bp; 40.9% G + C content). Annotation analysis has revealed 3511 coding DNA sequences and 99 RNAs; seven genes associated with the MEP pathway and five genes involved in the carotenoid pathway have been identified. The functionality and complementation of 4,4ʹ-diapophytoene synthase (CrtM) and two copies of heterologous 4,4ʹ-diapophytoene desaturase (CrtN) involved in carotenoid biosynthesis were analyzed in Escherichia coli.
Language
eng
URI
https://dspace.ajou.ac.kr/dev/handle/2018.oak/30043
DOI
https://doi.org/10.1016/j.jbiotec.2017.12.005
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Type
Article
Funding
This work was supported by a National Research Foundation of Korea (NRF) grant funded by the government of South Korea ( 2012M1A2A2671691 ), and by the Technology Innovation Program (No. 10051375) funded by the Ministry of Trade, Industry & Energy (MI, Korea) .
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College of Bio-convergence Engineering
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